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Its DRC violations. Just load final DEF and drc.rpt in OpenROAD GUI, find and fix the violations.

Hi Jack Zh. I also came across your point 1, which is kinda weird. For the meantime, I found a circumvention for the case that you are currently working on the wrapper and do not want to compile the user project first everytime you compile the wrapper. Run "make" on the user project once more, but this time as

make SHELL='sh -x' user_proj_example > alllogs

This prints the commands executed. Then wait for the docker call for the wrapper and copy that into a new "compile_wrapper.sh" file, which you then mark as executable. Afterwards you can run that file for the time being while working on the wrapper.